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Please review wip/bwa



This is the first in a long series of genomics packages I've developed 
and plan to submit.

pkglint -e runs clean, but I'm inviting some ruthlessly critical 
feedback on this one so that future packages will require minimal tampering.

Thanks,

     Jason

-- 
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   Jason W. Bacon
   jwbacon%tds.net@localhost

   If a problem can be solved,
   there's no need to worry.
   
   If it cannot be solved, then
   worrying will do no good.
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~


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